Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015849632.1_cds_XP_016510866.1_23661
CDS Infomation

[gene=LOC107828123] [db_xref=GeneID:107828123] [protein=patatin-like protein 6] [protein_id=XP_016510866.1] [location=join(27137..28279,30999..31283)] [gbkey=CDS]
Sequence

ATGGCGTGTAATCATCTAACAGATATGCAAGAGCCAAGCATAGATACAGATAAGTTAAGC
TACGAGATTTTCTCTATTCTAGAAAGCAAGTTCTTATTTGGTTACGATGATCAGAAGCTT
TGGATTCCTAAACAAATAGCTCCGGCAGTTGAACATCACAAGAACGTTAACGAGGTTGTG
TTGACATCATCACCGGTGAGGGAGGGGCACGGCGTTCAGGCAATTAAAAATCAGAGGGGT
AAAGTCTGTATCCTCAGCATAGATGGTGGTGGAATGCGAAGCATCCTATCAGGAAAAGCT
TTAGCGTATCTTGAACAGGCGTTGAAGGTTAAATCGGGAAATCCAGATGCTAGAATCGCC
GATTATTTCGACGTCGCTGCCGGTTCCGGCGTCGGAGGAATATTCACCACCATGCTCTTC
TCTACCAAGGACCAAAACCGCCCCTTGTTTCACGCTGAGGACACGTGGAAGCTTCTAGCA
GAACAAAGCAAAAAATTCTACCCTACCAAAGGTTCAAATTCCGGCGGTTTCCTCAGGCGA
ATTATCTGCAGCGGAGGCGGTGGTGGTTCGACCGGTTCAGCCACGACCGGTTTGGAGAAG
TCGATGAAGGAGGCCTTTGTAGATAAAACCGGTCGAAGCCTCACGTTAAAGGACACGTTG
AAACCGGTTTTAATCCCATGTTACGACCTTTCAAGTACGGCGCCATTTTTGTTTTCCAGA
GCTGATGCTTTAGAAACCGACAGCTTCGACTTCCGGCTATGGGAGGTTTGCAGAGCCACG
TCAGCAGAGCCGGGAGTGTTCGAGCCGGTTTGTATGAAGTCCGTCGACGGGAAAACCAAG
TGCGTGGCGGTTGACGGGGGATTAGCCATGAGCAACCCGGCGGCGGCGGCGATTACCCAC
GTGCTTCACAACAAGCAAGAATTCCCCTTCGTGAGAGGTGTGGAGGACATTTTGGTACTT
TCACTAGGGACAGGTCAGCTCCTTGAAGGAAGCTTTGAATATGAGCAAGTCAAGAATTGG
AAGGCAAAAGACTGGGCTCGACCAATGGCTCGAATTTCTGGCGATGGCTCCGCTGATGTG
GTGGACCACTCAGTTGCCATGGCTTTTGGCCAATACCGTAGCAGTAATTACGTGCGCATT
CAGGCTAACGGATCGAGCTTTGGTCGTTGTGGGGTGAATGGAGACGCTGACCCAAGTCCG
AGCAATGTGAAAACGTTGGTTGGGATAGCAGATGAAATGCTGAAACAGAAAAATGTAGAG
TCAGTGCTTTTCGGTGGCAAGAGAATTGCAGAGGAAAGCAATTTTGATAAACTTGATTGG
TTTGCTGGAGAATTAGTGCAAGAACATCAGAAAAGGAGTTGCCGGATAGCTCCCACTGTT
GCATTTAAGCAAGCTACACCGAAAGCTTCCCAAACATCTCTCAAATAG

Peptide Sequence

PEP ID

XP_016510866.1
PEP Infomation

PREDICTED: patatin-like protein 6 [Nicotiana tabacum]
Sequence

MACNHLTDMQEPSIDTDKLSYEIFSILESKFLFGYDDQKLWIPKQIAPAVEHHKNVNEVV
LTSSPVREGHGVQAIKNQRGKVCILSIDGGGMRSILSGKALAYLEQALKVKSGNPDARIA
DYFDVAAGSGVGGIFTTMLFSTKDQNRPLFHAEDTWKLLAEQSKKFYPTKGSNSGGFLRR
IICSGGGGGSTGSATTGLEKSMKEAFVDKTGRSLTLKDTLKPVLIPCYDLSSTAPFLFSR
ADALETDSFDFRLWEVCRATSAEPGVFEPVCMKSVDGKTKCVAVDGGLAMSNPAAAAITH
VLHNKQEFPFVRGVEDILVLSLGTGQLLEGSFEYEQVKNWKAKDWARPMARISGDGSADV
VDHSVAMAFGQYRSSNYVRIQANGSSFGRCGVNGDADPSPSNVKTLVGIADEMLKQKNVE
SVLFGGKRIAEESNFDKLDWFAGELVQEHQKRSCRIAPTVAFKQATPKASQTSLK

Transcript Sequence

Gene sequence data has not been registered.